I started playing ME3 last night using the SP Controller Mod (XB1 Elite controller), and I'm having a pretty serious issue. Everything works fine with the controller except for the ABXY buttons in certain menus. It's fine during normal play for things like opening doors, mapping buttons to skills, etc. It's menus in-game that are a problem. The biggies right now - now that I've gotten to the Normandy - are the War Room and the Galaxy Map. For both of these, I can't exit them at all - even the Esc keyboard button doesn't work (although for some menus it does). I have to quit the game and reload a save for it to be playable again, but once I go back in, nothing. The Galaxy Map is quite useless to me at this point. I can't select anything and there are no button prompts so obviously I can't progress in the story.

The only other mods I have came from me3tweaks.com - SP/MP controller support and interface scaling. Any ideas? I am running Windows 10 Anniversary Update with all patches, etc.
UPDATE 1 : Deleted the two Interface Scaling mods, re-applied the SP controller mod, and the Galaxy Map worked fine, including button prompts. Backed all the way out to Windows fine. Re-imported the base Interface Scaling mod, restarted the game, and the Galaxy Map worked fine again as well. Backed out to the main menu, but when trying to quit the game, there were no button prompts, and the ESc button did not work. Had to quit from the Alt-Tab menu.
UPDATE 2 : After restoring/repairing everything and trying again, I'm giving up on the Interface Scaling mod. It just doesn't work for me. And now that i look at it, apparently, there is some amount of scaling the SP Controller Mod is doing, and that's fine for now.